Services & Amenities at Our Maine Inn

The Flagship Inn offers a full array of services and amenities at our lodging in Boothbay Harbor, Maine. We are one of the few motels that are open year round and are always eager to welcome you with the finest accommodations.

Our restaurant, called simply Mr. C's Food & Spirits offers outstanding fare for breakfast, lunch, and dinner. Mr. C's is also available for business meetings, parties, and other private functions for up to 75 people.

Choose Us Instead of Boothbay Harbor Motels

Our comfortable and friendly Inn also features a large outdoor heated pool and spa for you to enjoy throughout the late spring and summer season, as well as our many amenities.

Convenient Boothbay Harbor Accommodations

Chances are you will be busy visiting the many attractions that surround us, but for your convenience there is a playground next door for the kids, laundry facility across the street, Hannaford grocery store next door, or you can take a nice walk through the Penny Lake Preserve, just steps from the Inn.

Flagship Inn Amenities:

We offer a Gathering area for guest use from 11:00 AM to 8:30 PM

  • Free Long-distance Calling
  • Free Continental Breakfast
  • Cable TV with HBO
  • Mini-refrigerators
  • Grills and Picnic Area
  • Desk or Activity Table
  • Hairdryers
  • Air Conditioning
  • Microwave (King Rooms)
  • Electronic Door Locks
  • Free Morning Newspaper
  • Non-Smoking Rooms
  • Free Parking
  • Free Wireless Internet
  • Pet friendly Rooms
  • AM/FM Alarm Clock with Radio
  • Irons and Ironing Boards
  • Direct Dial Phone with Voice Mail
  • Free Local and Toll-Free Calls
  • Wake-up Calls
  • Rollaway Beds
  • Jacuzzi
  • Adjoining Rooms                                 

The seasonal trolley conveniently arrives at our front door every 25 minutes from 10am - 5pm daily.

We take pride in offering the finest Boothbay Harbor, Maine accommodations, services and amenities. If you have any questions, we invite you to contact our Boothbay Harbor property. And keep us in mind when seeking lodging allowing pets in Boothbay Harbor, Maine. We are pet friendly!


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* All discount rates verified at check-in.

"Perhaps the perfect B&B." - John, Oklahoma